massDataset package

About

massdataset provide the mass_dataset class which is specifically developed and designed to organize the rectangular metabolomics data sets into a standard structure. massdataset package also provide a lot of base processing functions to process and operate the mass_dataset class. In additional, the mass_dataset class can be processed by all the packages from tidymass.

Install massdataset

You can install massdataset from GitLab.

if(!require(remotes)){
install.packages("remotes")
}
remotes::install_gitlab("jaspershen/massdataset")

or GitHub

remotes::install_github("tidymass/massdataset")

or tidymass.org

source("https://www.tidymass.org/tidymass-packages/install_tidymass.txt")
install_tidymass(from = "tidymass.org", which_package = "massdataset")

Citation

If you use massdataset in your publications, please cite this paper:

Shen, X., Yan, H., Wang, C. et al. TidyMass an object-oriented reproducible analysis framework for LC–MS data. Nat Commun 13, 4365 (2022).