Export mass_dataset Object to Files — export_mass

Exports the contents of a mass_dataset object to files. The files can be in CSV or XLSX format. Additionally, MS2 data can be exported in MSP or MGF format.

Usage

export_mass_dataset(
  object,
  file_type = c("csv", "xlsx"),
  ms2_file_type = c("msp", "mgf"),
  path = "."
)

Arguments

object: A mass_dataset object to be exported.
file_type: The type of file to export the data to. Options are "csv" or "xlsx". Default is "csv".
ms2_file_type: The type of file to export the MS2 data to. Options are "msp" or "mgf". Default is "msp".
path: The directory where the exported files will be saved. Default is the current directory.

Value

No return value. The function writes files to disk.

Author

Xiaotao Shen xiaotao.shen@outlook.com

Examples

if (FALSE) { # \dontrun{
data("expression_data")
data("sample_info")
data("variable_info")
object <- create_mass_dataset(
  expression_data = expression_data,
  sample_info = sample_info,
  variable_info = variable_info
)
export_mass_dataset(object, file_type = "csv", path = tempdir())
} # }