TidyMass packages

tidyMass

tidymass is a meta-package that installs and load the core packages listed below.

massDataset

massdataset is used organize metabolomics experiment data into a mass_dataset class object, that can be processed by all the tidymass packages.

massProcesser

massprocesser is used for LC-MS based untargeted metabolomics raw data processing.

massCleaner

masscleaner is used for data cleaning.

massQC

massqc is used for data quality assessment and control.

metID

metid is used for metabolite database construction and metabolite annotation.

massStat

massstat is used for statistical analysis.

metPath

metpath is used for pathway enrichment analysis.

massTools

masstools is a collection of useful tiny tools.

massConverter

massconverter is used to convert mass spectrometry raw data to other format data (mzXML, mxML, etc.).

massDatabase

massdatabase is used to operate the online databases.

Resources
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