getWorklist

Source: R/deprecated_functions.R

Generate sample and worklist. deprecated

getWorklist(
  table.name = "batch.xlsx",
  instrument = c("Thermo", "Agilent", "AB"),
  each.mode.number = 32,
  randommethod = c("no", "position", "injection"),
  samplenumber = NULL,
  QCstep = 8,
  conditionQCnumber = 8,
  qc.index.from = 1,
  dir = "D:\\Liang\\data\\PS4U\\HILIC\\batch3\\",
  method.path = "D:\\Liang\\Method\\urine\\HILIC\\",
  ms1.method.pos = "ZIC-HILIC_MS_pos",
  ms1.method.neg = "ZIC-HILIC_MS_neg",
  ms2.method.pos = c("ZIC-HILIC_MSMS_pos_NCE25", "ZIC-HILIC_MSMS_pos_NCE25",
    "ZIC-HILIC_MSMS_pos_NCE25", "ZIC-HILIC_MSMS_pos_NCE25"),
  ms2.method.neg = c("ZIC-HILIC_MSMS_neg_NCE25", "ZIC-HILIC_MSMS_neg_NCE25",
    "ZIC-HILIC_MSMS_neg_NCE25", "ZIC-HILIC_MSMS_neg_NCE25"),
  path = "."
)

Arguments

table.name

Sample name.
instrument

instrument.
each.mode.number

each.mode.number.
randommethod

See xcms.
samplenumber

See xcms.
QCstep

See xcms.
conditionQCnumber

See xcms.
qc.index.from

Number of threads.
dir

dir.
method.path

method.path.
ms1.method.pos

ms1.method.pos.
ms1.method.neg

ms1.method.neg.
ms2.method.pos

ms2.method.pos.
ms2.method.neg

ms2.method.neg.
path

The working directory.

Value

Peak table.

Author

Xiaotao Shen shenxt1990@163.com